• Perspectives on computational biology methods

    Updated: 2010-05-31 18:22:45
    Home About Science Store Twitter Subscribe Perspectives on computational biology methods May 31, 2010 There have been impressive advances in computational methods , allowing researchers to better understand biological and physiological systems at the atomic level . In its latest Perspectives in General Physiology series , the Journal of General Physiology JGP offers an in-depth look at several of these methods and the advantages of each as applied to membrane proteins , with special focus on ion channels . The Perspectives appear in the June issue www.jgp.org The main focus of computational biology is to develop mathematical modeling and computational techniques to better analyze biological systems . As guest editor Benoit Roux University of Chicago explains , no single method can provide

  • Compost Biology -- Organisms Involved in Composting

    Updated: 2010-05-31 10:42:29
    A compost heap is home to a complex ecosystem of bacteria, fungi, actinomycetes, other microorganisms and invertebrates which break down organic matter.

  • Research and development of universal influenza vaccines.

    Updated: 2010-05-31 04:42:06
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  • Recombinant luminal domain of human synaptotagmin II in combination with gangliosides inhibits the toxicity of botulinum neurotoxins in mice.

    Updated: 2010-05-31 04:42:05
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  • The cell biology of hepatitis C virus.

    Updated: 2010-05-31 04:42:04
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  • Apicoplast: keep it or leave it.

    Updated: 2010-05-31 04:42:03
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  • The dengue vector Aedes aegypti: what comes next.

    Updated: 2010-05-31 04:42:01
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  • Identification of a new hexadentate iron chelator capable of restricting the intramacrophagic growth of Mycobacterium avium.

    Updated: 2010-05-31 04:42:00
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  • Clinical isolates of Enterococcus faecalis aggregate human platelets.

    Updated: 2010-05-31 04:41:59
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  • Lack of B7-1 and B7-2 costimulatory molecules modulates the severity of group B Streptococcus-induced arthritis.

    Updated: 2010-05-31 04:41:58
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  • Neutrophils are important in early control of lung infection by Yersinia pestis.

    Updated: 2010-05-31 04:41:56
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  • Synthetic Microbe Comes to Life at the JCVI

    Updated: 2010-05-28 17:56:38
    Artificial life has begun with a self-replicating bacterium powered by a synthetic genome promising better drugs, vaccines and greener fuels.

  • Effect of antibiotics in the environment on microbial populations.

    Updated: 2010-05-27 23:00:00
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  • Engineering cellulolytic ability into bioprocessing organisms.

    Updated: 2010-05-27 23:00:00
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  • Characterization of catabolic meta-nitrophenol nitroreductase from Cupriavidus necator JMP134.

    Updated: 2010-05-27 23:00:00
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  • Characterisation of the flavin-free oxygen-tolerant azoreductase from Xenophilus azovorans KF46F in comparison to flavin-containing azoreductases.

    Updated: 2010-05-27 23:00:00
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  • A mini-Mu transposon-based method for multiple DNA fragment integration into bacterial genomes.

    Updated: 2010-05-27 23:00:00
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  • Biotechnological doxorubicin production: pathway and regulation engineering of strains for enhanced production.

    Updated: 2010-05-27 23:00:00
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  • Clinical and microbiological characteristics of community-acquired thoracic empyema or complicated parapneumonic effusion caused by Klebsiella pneumoniae in Taiwan

    Updated: 2010-05-27 11:19:27
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  • Efficacy and safety of rifampin containing regimen for staphylococcal prosthetic joint infections treated with debridement and retention

    Updated: 2010-05-27 11:19:24
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  • Severe Mediterranean spotted fever complicated by acute renal failure and herpetic oesophagitis.

    Updated: 2010-05-26 23:00:00
    We describe a case of severe Mediterranean spotted fever complicated by acute renal failure and associated with herpetic oesophagitis. Acyclovir therapy obtained remission of oesophageal symptoms within 48 hours. PMID: 20508004 [PubMed - as supplied by publisher] (Source: Journal of Medical Microbiology)

  • Serotype-specific invasive disease potential of Streptococcus pneumoniae in Czech children.

    Updated: 2010-05-26 23:00:00
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  • LAP, an alcohol acetaldehyde dehydrogenase enzyme in Listeria promotes bacterial adhesion to enterocyte-like Caco-2 cells only in pathogenic species.

    Updated: 2010-05-26 23:00:00
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  • PGM2 overexpression improves anaerobic galactose fermentation in Saccharomyces cerevisiae

    Updated: 2010-05-26 23:00:00
    Conclusion: PGM2 overexpression in S. cerevisiae from an integrative plasmid is sufficient to reduce the lag phase and to enhance the growth rate in anaerobic galactose fermentation, which results in an overall decrease in fermentation duration. This observation is of particular importance for the future development of stable industrial strains with enhanced PGM activity. (Source: Microbial Cell Factories)

  • Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae

    Updated: 2010-05-26 23:00:00
    . Log on register Feedback Support My details home journals A-Z subject areas advanced search authors reviewers libraries about my BioMed Central BMC Microbiology Volume 10 Viewing : options Abstract PDF 402KB Associated : material Readers' comments Related : literature Other articles by authors on Google Scholar Haley BJ Grim CJ Hasan NA Choi SY Chun J Brettin TS Bruce DC Challacombe JF Detter JC Han CS Huq A Colwell RR on PubMed Haley BJ Grim CJ Hasan NA Choi SY Chun J Brettin TS Bruce DC Challacombe JF Detter JC Han CS Huq A Colwell RR Related articles pages on Google on Google Scholar : Tools Download citation(s Email to a friend Order reprints Post a comment Post : to Citeulike Connotea Del.icio.us Facebook Mendeley Twitter Research article Comparative genomic analysis reveals

  • The highly cited SARS research literature.

    Updated: 2010-05-25 23:00:00
    Authors: Kostoff RN A chronically weak area in research papers, reports, and reviews is the complete identification of important background reference documents that formed the building blocks for the research. A method for systematically determining these important references is presented. Citation-Assisted Background (CAB) is based on the assumption that important documents tend to be highly cited. Application of CAB to the field of Severe Acute Respiratory Syndrome (SARS) research is presented. While CAB is a highly systematic approach for identifying highly cited references, it is not a substitute for the judgment of the researchers, and serves as a supplement. PMID: 20504120 [PubMed - as supplied by publisher] (Source: Critical Reviews in Microbiology)

  • Real-time PCR detection of Fe-type nitrile hydratase genes from environmental isolates suggests horizontal gene transfer between multiple genera.

    Updated: 2010-05-25 23:00:00
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  • The RNPP family of quorum-sensing proteins in Gram-positive bacteria.

    Updated: 2010-05-25 23:00:00
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  • Optimized bioprocess for production of fructofuranosidase by recombinant Aspergillus niger.

    Updated: 2010-05-25 23:00:00
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  • Efficient conversion of lactic acid to butanol with pH-stat continuous lactic acid and glucose feeding method by Clostridium saccharoperbutylacetonicum.

    Updated: 2010-05-25 23:00:00
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  • Interactions of Botryococcus braunii Cultures with Bacterial Biofilms.

    Updated: 2010-05-25 23:00:00
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  • The Impact and Development of the Germ Theory of Disease

    Updated: 2010-05-25 00:37:41
    The development of the germ theory of disease perhaps took longer than it should have, but its impact on modern medicine has been profound.

  • Lipid hydrolizing enzymes in virulence: Mycobacterium tuberculosis as a model system.

    Updated: 2010-05-24 23:00:00
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  • Expression of the antimicrobial peptide cecropin fused with human lysozyme in Escherichia coli.

    Updated: 2010-05-24 23:00:00
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  • Microbial production of meso-2,3-butanediol by metabolically engineered Escherichia coli under low oxygen condition.

    Updated: 2010-05-24 23:00:00
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  • Characterization of Mycobacterium tuberculosis Beijing isolates from the Mediterranean area

    Updated: 2010-05-24 23:00:00
    Conclusions: The Beijing lineage in our area is a non-homogeneous family, with only certain highly virulent representatives. The specific characterization of Beijing isolates in different settings could help us to accurately identify the virulent representatives before making general assumptions about this lineage. (Source: BMC Microbiology - Latest articles)

  • Novel vacuoles in Toxoplasma

    Updated: 2010-05-24 23:00:00
    (Source: Molecular Microbiology)

  • Aminoglycoside use in intensive care units and aminoglycoside nephrotoxicity. Comment letter 2.

    Updated: 2010-05-23 23:42:10
    Authors: Peloquin C PMID: 20480959 [PubMed - in process] (Source: Antimicrobial Agents and Chemotherapy)MedWorm Message: Register forMedMatcha, MedWorm's medical advertising network, and receive $5 free advertising.

  • Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

    Updated: 2010-05-23 23:00:00
    Conclusions: The results demonstrate that C. cellulolyticum, D. vulgaris, and G. sulfurreducens can be grown in coculture in a continuous culture system in which D. vulgaris and G.sulfurreducens are dependent upon the metabolic byproducts of C. cellulolyticum for nutrients. This represents a step towards developing a 54 tractable model ecosystem comprised of members representing the functional groups of a trophic network. (Source: BMC Microbiology - Latest articles)

  • Compost Ecology -- A Complex Ecosystem of Composting Organisms

    Updated: 2010-05-23 08:46:28
    A compost heap supports a complex and dynamic ecological food-web of microorganisms which break down organic matter and release nutrients to create humus.

  • Efficient soluble protein production on transgenic silkworms expressing cytoplasmic chaperones.

    Updated: 2010-05-22 23:00:00
    In conclusion, the His-tagged baculovirus expression system featuring the chaperone effect TGS-HSP70/40 and TGS-HOP7 silkworms is effective for increasing the yields of soluble and functional foreign gene products. PMID: 20496148 [PubMed - as supplied by publisher] (Source: Applied Microbiology and Biotechnology)MedWorm Message: Register forMedMatcha, MedWorm's medical advertising network, and receive $5 free advertising.

  • Activity of tigecycline and comparators against recent clinical isolates of Finegoldia magna from Europe

    Updated: 2010-05-22 16:48:28
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  • Positive culture for Klebsiella pneumoniae in relevant sputum samples as a predictor of rapidly fatal outcome in septic patients at medical intensive care units

    Updated: 2010-05-22 06:57:30
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  • Kinetics of growth and caffeine demethylase production of Pseudomonas sp. in bioreactor.

    Updated: 2010-05-21 23:00:00
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  • Natural functions of mycotoxins and control of their biosynthesis in fungi.

    Updated: 2010-05-21 23:00:00
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  • Desquamated epithelial cells covered with a polymicrobial biofilm typical for bacterial vaginosis are present in randomly selected cryopreserved donor semen

    Updated: 2010-05-21 23:00:00
    Error DOI Not Found The DOI you requested 10.1111 j.1574-695X.2010.00688.x cannot be found in the Handle . System Possible reasons for the error : are the DOI has not been created the DOI is cited incorrectly in your source the DOI does not resolve due to a system problem If you believe you have requested a DOI that should be found , you may report this error by filling out the form : below Missing : DOI Referring : Page E-mail : address : Comments DOI Web Site

  • A Morphologically Simple Species of Acrasis (Heterolobosea, Excavata), Acrasis helenhemmesae n. sp.

    Updated: 2010-05-21 23:00:00
    Error DOI Not Found The DOI you requested 10.1111 j.1550-7408.2010.00481.x cannot be found in the Handle . System Possible reasons for the error : are the DOI has not been created the DOI is cited incorrectly in your source the DOI does not resolve due to a system problem If you believe you have requested a DOI that should be found , you may report this error by filling out the form : below Missing : DOI Referring : Page E-mail : address : Comments DOI Web Site

  • Aseptic Technique to Pour Bacterial Growth Media in Petri Dishes

    Updated: 2010-05-21 16:08:21
    Bacteria are typically grown in isolated cultures, with one type of bacteria grown on each plate. Therefore, the growing medium must initially be sterile.

  • Review of "Anaerobic Parasitic Protozoa: Genomics and Molecular Biology" by C. G. Clark, P. J. Johnson and R. D. Adam

    Updated: 2010-05-20 23:00:00
    (Source: Parasites and Vectors)

  • IN MEMORIAM: PETER GORDON VERITY (1953–2009)

    Updated: 2010-05-20 23:00:00
    (Source: The Journal of Eukaryotic Microbiology)

  • Molecular Divergence Defines Two Distinct Lineages of Crithidia bombi (Trypanosomatidae), Parasites of Bumblebees

    Updated: 2010-05-20 23:00:00
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  • Final Exam

    Updated: 2010-05-14 17:54:35
    The Final Exam will be Tuesday May 18th from 10AM-12PM in Sanford 001. Here is some information on the exam: 100 questions all matching, multiple choice etc. It covers pretty much everything that we have covered. There are no questions from lab except those that directly pertain to lecture material. Breakdown is as follows with the topic followed by the [...]

  • Distinuished Biomedical Scholar to Speak on Brain Circuitry

    Updated: 2010-05-10 17:33:37
    Hollis Cline, Ph.D. will speak as part of the College’s Distinguished Biomedical Scholar Lecture Series on Thursday, May 20.  Cline’s talk is entitled “Building Brain Circuits,” and will be held in Urmila Sahai Seminar Room (2117 MERF) at 4 pm.  The talk is sponsored by the Department of Molecular Physiology and Biophysics. Cline received her Ph.D. [...]

  • Tissue Procurement Core Announces New Communication Tool

    Updated: 2010-05-10 15:32:04
    In an effort to increase communication with investigators, the Tissue Procurement Core Facility has launched a new wiki portal.  The new TissueWiki portal will serve as a way for investigators to leave comments for the Facility, ask questions, or communicate with Facility staff or other investigators utilizing the core’s services. Comments posted on the TissueWiki system [...]

  • Congratulations 2010 Research Week Poster Winners

    Updated: 2010-05-10 15:08:11
    Congratulations to the 2010 Research Week poster session winners!  Both poster sessions were again a large success, featuring over 100 participants each day.  Winners were recognized by College and University leadership April 14 during the annual Research Week awards ceremony. Below, view award winners from the Carver College of Medicine, Institute for Clinical and Translational Science, [...]

  • Thank You 2010 Poster Judges

    Updated: 2010-05-10 15:05:20
    Thank you to our faculty and research staff volunteers from the Carver College of Medicine for making time in their busy schedules to perform the difficult task of judging an outstanding collection of posters.  View a list of volunteers below. Lee-Ann Allen Michael Anderson Max Baker Alex Bassuk Gail Bishop Tim Brennan Garry Buettner Amit Choudhury Keala Clark Robert Cornell Natalie Denburg Joseph Dillon Kevin Doerschug Adrian Elcock Sarah England Eric [...]

  • Research Week Seminars Available Online

    Updated: 2010-05-10 15:02:48
    In an effort to make Research Week seminars available to all campus investigators, the 2010 talks are now available for viewing online.  Many of the videos utilize a new lecture-capture system recently implemented on the CCOM campus.  The system offers video footage of speakers along side a screen capture of Powerpoint slides and other visual [...]

  • EB2010

    Updated: 2010-05-09 19:24:27
    As the winner of Scientist Solutions July 2009 MVP award, I decided to spend the reward on partially covering the expenses for my adventure to Experimental Biology (EB) 2010/the American Society for Biochemistry and Molecular Biology (ASBMB) annual meeting in Anaheim, California. It is by far the largest conference that I have attended in my life, with almost 12 thousand registrants on the last day of the meeting according to the “census” blackboard placed at the meeting entrance. ...

  • Meeting Report from the American Society for Biochemistry and Molecular Biology 2010 Annual Meeting

    Updated: 2010-05-09 15:50:18
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  • Exam 3 Review

    Updated: 2010-05-08 23:11:51
    Exam 3 Will Cover the Following Topics: Control of Microbial Growth   (includes physical and chemical factors as well as chemotherapeutic agents). Prions and Prion Diseases Infection and Disease (Disease Processes) Epidemiology Host Defense Systems Some sample essay questions for exam 3 (Thursday May 12th): 1.  Based on your knowledge of microbiology design a perfect bacterial pathogen.  Be realistic in your [...]

  • Differential Stains for Identifying Bacteria

    Updated: 2010-05-07 15:33:02
    The Gram, Ziehl Neelsen acid fast, and endospore stains are differential tests used to help identify bacteria. Here's how they work.

  • Ticks and Lyme Disease

    Updated: 2010-05-05 23:00:10
    Cases of Lyme disease, caused by deer ticks, are on the increase in the U.S. Staying vigilant is the best way to avoid infection.

  • Traitor Human DNA Helps Viruses Cause Cancer

    Updated: 2010-05-03 22:24:43
    Home About Archives Science Bookstore Terms of Service Privacy Policy Contact Us ADVERTISMENT ADVERTISMENT Tags cancer medicine health care lesley medical information therapeutic targets Traitor Human DNA Helps Viruses Cause Cancer Posted on 03 May 2010 21:24 by Alfie VN:F 1.8.1_1037 please wait . Rating : 0.0 5 0 votes cast Story : Summary The researchers discovered that viruses can exploit the bodys DNA dampening its antiviral immune response and allowing infection to take hold more easily . Scientists funded by Cancer Research UK and the Medical Research Council at the UCL Cancer Institute showed this happened with the Kaposi sarcomaherpesvirus which causes the cancer Kaposi Sarcoma and also with the herpessimplex virus which causes cold sores . Lead author , Cancer Research UKs

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